Protein–RNA interactions for Protein: E9Q942

Smim13, Small integral membrane protein 13, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim13E9Q942 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Smim13E9Q942 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.04□□□□□ -0.16
Smim13E9Q942 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smim13E9Q942 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim13E9Q942 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smim13E9Q942 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.03□□□□□ -0.16
Smim13E9Q942 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smim13E9Q942 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smim13E9Q942 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smim13E9Q942 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim13E9Q942 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smim13E9Q942 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smim13E9Q942 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim13E9Q942 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smim13E9Q942 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smim13E9Q942 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smim13E9Q942 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smim13E9Q942 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smim13E9Q942 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim13E9Q942 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smim13E9Q942 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smim13E9Q942 Gm37136-201ENSMUST00000194368 194 ntBASIC14.02□□□□□ -0.17
Smim13E9Q942 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smim13E9Q942 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smim13E9Q942 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim13E9Q942 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smim13E9Q942 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smim13E9Q942 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smim13E9Q942 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.01□□□□□ -0.17
Smim13E9Q942 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim13E9Q942 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim13E9Q942 Gm6627-201ENSMUST00000218299 2386 ntBASIC14□□□□□ -0.17
Smim13E9Q942 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smim13E9Q942 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smim13E9Q942 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.99□□□□□ -0.17
Smim13E9Q942 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim13E9Q942 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.98□□□□□ -0.17
Smim13E9Q942 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smim13E9Q942 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smim13E9Q942 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC13.98□□□□□ -0.17
Smim13E9Q942 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.98□□□□□ -0.17
Smim13E9Q942 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms