Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC9.67□□□□□ -0.86
Rnf213E9Q555 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC9.67□□□□□ -0.86
Rnf213E9Q555 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC9.67□□□□□ -0.86
Rnf213E9Q555 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rnf213E9Q555 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rnf213E9Q555 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC9.66□□□□□ -0.86
Rnf213E9Q555 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rnf213E9Q555 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rnf213E9Q555 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rnf213E9Q555 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rnf213E9Q555 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Rnf213E9Q555 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rnf213E9Q555 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Rnf213E9Q555 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rnf213E9Q555 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
Rnf213E9Q555 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC9.65□□□□□ -0.87
Rnf213E9Q555 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Rnf213E9Q555 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Gm6659-201ENSMUST00000174752 547 ntBASIC9.64□□□□□ -0.87
Rnf213E9Q555 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Nrn1-203ENSMUST00000223611 1443 ntBASIC9.64□□□□□ -0.87
Rnf213E9Q555 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Rnf213E9Q555 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Gm10167-201ENSMUST00000150411 1479 ntBASIC9.63□□□□□ -0.87
Rnf213E9Q555 Gm15378-201ENSMUST00000121894 207 ntBASIC9.63□□□□□ -0.87
Rnf213E9Q555 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Gm5867-201ENSMUST00000063197 592 ntBASIC9.63□□□□□ -0.87
Rnf213E9Q555 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Gm21596-201ENSMUST00000178049 1316 ntBASIC9.63□□□□□ -0.87
Rnf213E9Q555 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC9.63□□□□□ -0.87
Rnf213E9Q555 AC175538.1-201ENSMUST00000225343 1269 ntBASIC9.63□□□□□ -0.87
Rnf213E9Q555 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Rnf213E9Q555 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Rnf213E9Q555 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms