Protein–RNA interactions for Protein: D3Z3U4

9630041A04Rik, RIKEN cDNA 9630041A04 gene, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9630041A04RikD3Z3U4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
9630041A04RikD3Z3U4 Gm5408-201ENSMUST00000197998 747 ntBASIC19.36■□□□□ 0.69
9630041A04RikD3Z3U4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
9630041A04RikD3Z3U4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
9630041A04RikD3Z3U4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
9630041A04RikD3Z3U4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
9630041A04RikD3Z3U4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9630041A04RikD3Z3U4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9630041A04RikD3Z3U4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9630041A04RikD3Z3U4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
9630041A04RikD3Z3U4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
9630041A04RikD3Z3U4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
9630041A04RikD3Z3U4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
9630041A04RikD3Z3U4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
9630041A04RikD3Z3U4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
9630041A04RikD3Z3U4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
9630041A04RikD3Z3U4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
9630041A04RikD3Z3U4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
9630041A04RikD3Z3U4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
9630041A04RikD3Z3U4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
9630041A04RikD3Z3U4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.31■□□□□ 0.68
9630041A04RikD3Z3U4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.31■□□□□ 0.68
9630041A04RikD3Z3U4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
9630041A04RikD3Z3U4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.31■□□□□ 0.68
9630041A04RikD3Z3U4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
9630041A04RikD3Z3U4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
9630041A04RikD3Z3U4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
9630041A04RikD3Z3U4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms