Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pramef20B1ARV6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pramef20B1ARV6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pramef20B1ARV6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.2■□□□□ 0.66
Pramef20B1ARV6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Spcs1-204ENSMUST00000226782 949 ntBASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pramef20B1ARV6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.18■□□□□ 0.66
Pramef20B1ARV6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pramef20B1ARV6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pramef20B1ARV6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pramef20B1ARV6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pramef20B1ARV6 Gm5874-201ENSMUST00000096101 508 ntBASIC19.17■□□□□ 0.66
Pramef20B1ARV6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pramef20B1ARV6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pramef20B1ARV6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pramef20B1ARV6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Gm26833-201ENSMUST00000180899 440 ntBASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pramef20B1ARV6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pramef20B1ARV6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.14■□□□□ 0.66
Pramef20B1ARV6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pramef20B1ARV6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pramef20B1ARV6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms