Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.49■□□□□ 0.23
Col6a4A2AX52 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.49■□□□□ 0.23
Col6a4A2AX52 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a4A2AX52 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a4A2AX52 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.47■□□□□ 0.23
Col6a4A2AX52 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a4A2AX52 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a4A2AX52 Gm13146-201ENSMUST00000118508 780 ntBASIC16.46■□□□□ 0.23
Col6a4A2AX52 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.46■□□□□ 0.23
Col6a4A2AX52 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col6a4A2AX52 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Gm6420-201ENSMUST00000193885 723 ntBASIC16.45■□□□□ 0.22
Col6a4A2AX52 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.45■□□□□ 0.22
Col6a4A2AX52 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Gm715-201ENSMUST00000117865 831 ntBASIC16.45■□□□□ 0.22
Col6a4A2AX52 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.45■□□□□ 0.22
Col6a4A2AX52 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a4A2AX52 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.44■□□□□ 0.22
Col6a4A2AX52 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a4A2AX52 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.43■□□□□ 0.22
Col6a4A2AX52 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a4A2AX52 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Gm10812-201ENSMUST00000099864 546 ntBASIC16.42■□□□□ 0.22
Col6a4A2AX52 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a4A2AX52 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms