Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim17A0A504 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smim17A0A504 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.71■□□□□ 0.43
Smim17A0A504 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim17A0A504 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smim17A0A504 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim17A0A504 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smim17A0A504 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.71■□□□□ 0.42
Smim17A0A504 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.7■□□□□ 0.42
Smim17A0A504 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smim17A0A504 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smim17A0A504 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smim17A0A504 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.69■□□□□ 0.42
Smim17A0A504 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smim17A0A504 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Gm6311-201ENSMUST00000073790 878 ntBASIC17.69■□□□□ 0.42
Smim17A0A504 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.69■□□□□ 0.42
Smim17A0A504 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Smim17A0A504 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smim17A0A504 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim17A0A504 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim17A0A504 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Smim17A0A504 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim17A0A504 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim17A0A504 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smim17A0A504 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim17A0A504 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smim17A0A504 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Smim17A0A504 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Smim17A0A504 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.67■□□□□ 0.42
Smim17A0A504 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smim17A0A504 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.67■□□□□ 0.42
Smim17A0A504 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smim17A0A504 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.66■□□□□ 0.42
Smim17A0A504 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.66■□□□□ 0.42
Smim17A0A504 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smim17A0A504 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smim17A0A504 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Smim17A0A504 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.65■□□□□ 0.42
Smim17A0A504 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smim17A0A504 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smim17A0A504 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smim17A0A504 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smim17A0A504 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smim17A0A504 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smim17A0A504 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms