Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mindy4b-psA0A1W2P7H6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.7■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mindy4b-psA0A1W2P7H6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.64■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Gm27801-201ENSMUST00000184174 223 ntBASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mindy4b-psA0A1W2P7H6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms