Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Igkv1-88A0A140T8N1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Igkv1-88A0A140T8N1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Igkv1-88A0A140T8N1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Igkv1-88A0A140T8N1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Igkv1-88A0A140T8N1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Igkv1-88A0A140T8N1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Igkv1-88A0A140T8N1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms