Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv3-5A0A140T8M6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv3-5A0A140T8M6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Notumos-201ENSMUST00000151998 2659 ntBASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv3-5A0A140T8M6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv3-5A0A140T8M6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Gm15820-201ENSMUST00000201566 728 ntBASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv3-5A0A140T8M6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms