Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Gm9988-201ENSMUST00000069786 435 ntBASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.1■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.09■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.09■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Igkv5-43A0A0B4J1J2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm13234-201ENSMUST00000120010 747 ntBASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm18671-201ENSMUST00000214826 683 ntBASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm42569-201ENSMUST00000200539 472 ntBASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 AV356131-201ENSMUST00000206201 750 ntBASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-43A0A0B4J1J2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gm27405-201ENSMUST00000184201 112 ntBASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv5-43A0A0B4J1J2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.02■□□□□ 0.79
Igkv5-43A0A0B4J1J2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Igkv5-43A0A0B4J1J2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv5-43A0A0B4J1J2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv5-43A0A0B4J1J2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Igkv5-43A0A0B4J1J2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Igkv5-43A0A0B4J1J2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-43A0A0B4J1J2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv5-43A0A0B4J1J2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms