Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv16A0A0B4J1H3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv16A0A0B4J1H3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv16A0A0B4J1H3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trbv16A0A0B4J1H3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 AA386476-201ENSMUST00000098781 1665 ntBASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv16A0A0B4J1H3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv16A0A0B4J1H3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trbv16A0A0B4J1H3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.08□□□□□ -0.15
Trbv16A0A0B4J1H3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv16A0A0B4J1H3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv16A0A0B4J1H3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Gm7417-201ENSMUST00000192950 473 ntBASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv16A0A0B4J1H3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv16A0A0B4J1H3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms