Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv5A0A0B4J1G9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv5A0A0B4J1G9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv5A0A0B4J1G9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv5A0A0B4J1G9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv5A0A0B4J1G9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv5A0A0B4J1G9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv5A0A0B4J1G9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Trbv5A0A0B4J1G9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv5A0A0B4J1G9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv5A0A0B4J1G9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms