Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Gm43173-201ENSMUST00000202246 593 ntBASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Trbc1A0A0A6YWV4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbc1A0A0A6YWV4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbc1A0A0A6YWV4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbc1A0A0A6YWV4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Gm43017-201ENSMUST00000198296 752 ntBASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Serp2-204ENSMUST00000228055 705 ntBASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.88■□□□□ 0.45
Trbc1A0A0A6YWV4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.87■□□□□ 0.45
Trbc1A0A0A6YWV4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.86■□□□□ 0.45
Trbc1A0A0A6YWV4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms