Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13-4-dv7A0A075B6C2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Cap2-205ENSMUST00000225824 1634 ntBASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.44□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Gm43566-201ENSMUST00000196851 808 ntBASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13-4-dv7A0A075B6C2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms