Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6d-5A0A075B6B9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm11175-201ENSMUST00000116172 543 ntBASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm45444-201ENSMUST00000211394 898 ntBASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6d-5A0A075B6B9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6d-5A0A075B6B9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-5A0A075B6B9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6d-5A0A075B6B9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav6d-5A0A075B6B9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6d-5A0A075B6B9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6d-5A0A075B6B9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6d-5A0A075B6B9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6d-5A0A075B6B9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms