Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Etf1-202ENSMUST00000180351 108 ntBASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Gm7417-201ENSMUST00000192950 473 ntBASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6n-6A0A075B6B2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6n-6A0A075B6B2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6n-6A0A075B6B2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6n-6A0A075B6B2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Grk6-206ENSMUST00000224995 2971 ntBASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6n-6A0A075B6B2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-6A0A075B6B2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-6A0A075B6B2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav6n-6A0A075B6B2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-6A0A075B6B2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-6A0A075B6B2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Gm45102-201ENSMUST00000207427 857 ntBASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav6n-6A0A075B6B2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms