Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm10232-201ENSMUST00000089221 720 ntBASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Gm5921-201ENSMUST00000075898 882 ntBASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav15-2-dv6-2A0A075B650 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Gm43530-201ENSMUST00000195920 274 ntBASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Gm40881-201ENSMUST00000223397 166 ntBASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Cap2-205ENSMUST00000225824 1634 ntBASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Trav15-2-dv6-2A0A075B650 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms