Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7-6A0A075B640 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-6A0A075B640 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav7-6A0A075B640 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Gm7143-201ENSMUST00000222811 859 ntBASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-6A0A075B640 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trav7-6A0A075B640 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-6A0A075B640 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-6A0A075B640 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-6A0A075B640 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav7-6A0A075B640 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-6A0A075B640 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav7-6A0A075B640 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-6A0A075B640 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav7-6A0A075B640 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms