Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16nA0A075B634 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16nA0A075B634 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16nA0A075B634 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16nA0A075B634 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16nA0A075B634 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav16nA0A075B634 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16nA0A075B634 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.75□□□□□ -0.05
Trav16nA0A075B634 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16nA0A075B634 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav16nA0A075B634 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav16nA0A075B634 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav16nA0A075B634 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav16nA0A075B634 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Gm10399-202ENSMUST00000202768 748 ntBASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav16nA0A075B634 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav16nA0A075B634 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Trav16nA0A075B634 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav16nA0A075B634 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav16nA0A075B634 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav16nA0A075B634 Golph3-205ENSMUST00000228671 2842 ntBASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav16nA0A075B634 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms