Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav16d-dv11A0A075B617 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav16d-dv11A0A075B617 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16d-dv11A0A075B617 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trav16d-dv11A0A075B617 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16d-dv11A0A075B617 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav16d-dv11A0A075B617 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav16d-dv11A0A075B617 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav16d-dv11A0A075B617 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.32□□□□□ -0.12
Trav16d-dv11A0A075B617 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Rarb-207ENSMUST00000225921 2756 ntBASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav16d-dv11A0A075B617 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.3□□□□□ -0.12
Trav16d-dv11A0A075B617 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav16d-dv11A0A075B617 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms