Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-1A0A075B606 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Mir6236-201ENSMUST00000184437 123 ntBASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Gm8495-201ENSMUST00000188740 694 ntBASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav13d-1A0A075B606 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13d-1A0A075B606 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Gm40848-201ENSMUST00000221998 324 ntBASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Trav13d-1A0A075B606 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Gm43060-201ENSMUST00000200621 289 ntBASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav13d-1A0A075B606 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-1A0A075B606 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-1A0A075B606 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms