Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-55A0A075B5W6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ighv1-55A0A075B5W6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Gm27454-201ENSMUST00000185090 204 ntBASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-55A0A075B5W6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Gm12251-201ENSMUST00000117893 792 ntBASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Mir7075-201ENSMUST00000184187 82 ntBASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv1-55A0A075B5W6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv1-55A0A075B5W6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Ighv1-55A0A075B5W6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv1-55A0A075B5W6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-55A0A075B5W6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-55A0A075B5W6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-55A0A075B5W6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-55A0A075B5W6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms