Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ighv3-1A0A075B5S6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Gm42778-201ENSMUST00000199644 553 ntBASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv3-1A0A075B5S6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ighv3-1A0A075B5S6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv3-1A0A075B5S6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv3-1A0A075B5S6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Gm37179-201ENSMUST00000194862 823 ntBASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv3-1A0A075B5S6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ighv3-1A0A075B5S6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv3-1A0A075B5S6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv3-1A0A075B5S6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 AV356131-201ENSMUST00000206201 750 ntBASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-1A0A075B5S6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms