Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm17221-201ENSMUST00000163909 481 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm17073-201ENSMUST00000168069 556 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm26119-201ENSMUST00000175601 104 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm26976-201ENSMUST00000182929 908 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm7467-201ENSMUST00000185173 652 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm17877-201ENSMUST00000192578 814 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm5363-201ENSMUST00000211927 938 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Capsl-202ENSMUST00000226688 739 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Fbxo34-202ENSMUST00000095941 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Lrrc55-202ENSMUST00000111601 2900 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Zfp42-203ENSMUST00000211248 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Pcdhb5-201ENSMUST00000078271 3535 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm13120-201ENSMUST00000117343 1446 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Hmgb3O54879 Orai2-202ENSMUST00000196454 3990 ntTSL 5 BASIC8.03□□□□□ -1.12
Hmgb3O54879 Gm38148-201ENSMUST00000195166 3012 ntBASIC8.03□□□□□ -1.12
Hmgb3O54879 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Manba-201ENSMUST00000029814 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Mylk3-201ENSMUST00000034133 3696 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Gm38059-201ENSMUST00000193746 1999 ntBASIC8.02□□□□□ -1.12
Hmgb3O54879 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Hmgb3O54879 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb3O54879 Fam169a-201ENSMUST00000042517 4547 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gtf2f2-201ENSMUST00000088922 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm25562-201ENSMUST00000104608 133 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm12826-201ENSMUST00000121841 379 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm25953-201ENSMUST00000175338 83 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm20781-201ENSMUST00000193154 693 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm21736-201ENSMUST00000195399 693 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm44329-201ENSMUST00000197469 112 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC8.02□□□□□ -1.13
Hmgb3O54879 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Hmgb3O54879 AC153505.1-201ENSMUST00000218819 1071 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 AC160991.1-201ENSMUST00000224924 753 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 AC156016.4-201ENSMUST00000227470 647 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm15204-201ENSMUST00000119454 2281 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Tbccd1-201ENSMUST00000004576 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm44740-201ENSMUST00000205603 1614 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Ovch2-201ENSMUST00000106755 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Cln3-202ENSMUST00000084589 3203 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Dbndd2-203ENSMUST00000109349 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Gm6783-201ENSMUST00000120916 1437 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb3O54879 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Olfr749-202ENSMUST00000214290 1330 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Hmgb3O54879 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Hmgb3O54879 AC022682.1-201ENSMUST00000224624 2023 ntBASIC8.02□□□□□ -1.13
Hmgb3O54879 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Hmgb3O54879 Ttyh1-206ENSMUST00000129423 4355 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Hmgb3O54879 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Hmgb3O54879 Tnfrsf1b-201ENSMUST00000030336 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms