Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dag1-202ENSMUST00000166905 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm10390-201ENSMUST00000180812 3975 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm13914-201ENSMUST00000118202 991 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm23582-201ENSMUST00000158530 139 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm2253-201ENSMUST00000211775 414 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm18646-201ENSMUST00000212240 1063 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 CT009721.1-201ENSMUST00000213590 770 ntTSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 AC140314.1-201ENSMUST00000219549 554 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 CT025603.1-201ENSMUST00000224040 448 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 AC165260.2-201ENSMUST00000225371 395 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 AC161581.1-201ENSMUST00000228696 318 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm6684-201ENSMUST00000053717 685 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 n-R5s25-201ENSMUST00000082923 119 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Ubash3b-206ENSMUST00000151485 2231 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 AC154354.1-203ENSMUST00000225565 1364 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Upf2-201ENSMUST00000060092 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Dpysl2-201ENSMUST00000022629 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Smim7-203ENSMUST00000167290 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Asb3-201ENSMUST00000020551 3228 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Ccdc120-201ENSMUST00000033490 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Osbpl3-201ENSMUST00000071728 3307 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Atp5g1-204ENSMUST00000178611 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm43362-201ENSMUST00000198192 2470 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Rnf41-202ENSMUST00000171342 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Limk2-202ENSMUST00000101640 3711 ntTSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm6351-203ENSMUST00000139828 1542 ntAPPRIS P5 TSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Tc2n-204ENSMUST00000162735 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Olfr31-201ENSMUST00000100872 954 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm25723-201ENSMUST00000104530 126 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm7799-201ENSMUST00000133080 476 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Cd209b-203ENSMUST00000171635 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm17799-201ENSMUST00000183270 667 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm37144-201ENSMUST00000195445 1150 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Olfr692-202ENSMUST00000217827 1126 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm5951-201ENSMUST00000220283 504 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Kcnh6-201ENSMUST00000001965 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms