Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 AC107711.4-201ENSMUST00000228948 440 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm25973-201ENSMUST00000083717 127 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Jam2-202ENSMUST00000114195 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Cdc25b-202ENSMUST00000079857 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Csf2rb-201ENSMUST00000096355 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Gm45440-201ENSMUST00000209826 1655 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 AC238811.2-201ENSMUST00000224554 1509 ntBASIC9.35□□□□□ -0.91
Clrn1Q8K445 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Cep63-211ENSMUST00000216281 1791 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 5430416N02Rik-201ENSMUST00000180779 3486 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Pear1-203ENSMUST00000090981 4314 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Clrn1Q8K445 Ablim1-206ENSMUST00000111528 2481 ntTSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Olfr1491-204ENSMUST00000216366 1726 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm5174-201ENSMUST00000171131 1423 ntBASIC9.34□□□□□ -0.91
Clrn1Q8K445 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm15798-201ENSMUST00000120082 408 ntBASIC9.34□□□□□ -0.91
Clrn1Q8K445 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm44139-201ENSMUST00000204903 373 ntBASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Rab38-202ENSMUST00000208478 579 ntTSL 3 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 AC107752.1-201ENSMUST00000219362 469 ntBASIC9.34□□□□□ -0.91
Clrn1Q8K445 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 AC114573.1-201ENSMUST00000224120 1210 ntBASIC9.34□□□□□ -0.91
Clrn1Q8K445 AC130217.1-201ENSMUST00000224146 909 ntBASIC9.34□□□□□ -0.91
Clrn1Q8K445 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Wfs1-202ENSMUST00000166339 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Cdh1-201ENSMUST00000000312 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Fam110c-201ENSMUST00000041133 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Clrn1Q8K445 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Ptk2-209ENSMUST00000226988 4444 ntAPPRIS ALT1 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Klf17-201ENSMUST00000062747 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 AC132833.1-202ENSMUST00000228875 1690 ntBASIC9.33□□□□□ -0.92
Clrn1Q8K445 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Hdac7-206ENSMUST00000119670 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clrn1Q8K445 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms