Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr209-203ENSMUST00000208875 1194 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Hmgb3O54879 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm18515-201ENSMUST00000219755 797 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 AC093022.1-201ENSMUST00000226949 1072 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm6430-201ENSMUST00000054664 1248 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 AC115746.1-201ENSMUST00000228949 3617 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Bcl2l14-202ENSMUST00000111960 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm45330-201ENSMUST00000209681 1575 ntTSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Pear1-203ENSMUST00000090981 4314 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 AC130823.1-201ENSMUST00000228929 1549 ntBASIC8.13□□□□□ -1.11
Hmgb3O54879 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Olfr214-203ENSMUST00000214699 2610 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Olfr214-204ENSMUST00000215846 2605 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Hmgb3O54879 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Hmgb3O54879 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Zeb2-215ENSMUST00000200844 4064 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm38340-201ENSMUST00000195039 4008 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Trpv2-202ENSMUST00000102643 2650 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Hsd17b7-201ENSMUST00000027989 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm15602-201ENSMUST00000116162 465 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm12997-201ENSMUST00000120207 640 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm8436-201ENSMUST00000210152 1080 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm5749-201ENSMUST00000210673 1090 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 AC165260.2-203ENSMUST00000224237 336 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Arhgap10-203ENSMUST00000210922 2208 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 AC140393.1-201ENSMUST00000227959 1581 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Hmgb3O54879 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Tomm40l-202ENSMUST00000111326 2753 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Wdr61-202ENSMUST00000118771 3372 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm5310-201ENSMUST00000197861 1511 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm37052-201ENSMUST00000194929 1831 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Tifab-202ENSMUST00000225063 2718 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Arhgap24-201ENSMUST00000070000 3632 ntTSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Ankmy1-201ENSMUST00000112998 3243 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Hmgb3O54879 Gm37521-201ENSMUST00000193177 2045 ntBASIC8.12□□□□□ -1.11
Hmgb3O54879 Atp9a-202ENSMUST00000109175 3729 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Hmgb3O54879 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Dis3l2-201ENSMUST00000065694 3085 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Hmgb3O54879 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Zfp185-203ENSMUST00000164800 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC8.11□□□□□ -1.11
Hmgb3O54879 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Cabyr-206ENSMUST00000186263 2125 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Dlg3-203ENSMUST00000113735 3692 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Gm15519-201ENSMUST00000120088 1566 ntBASIC8.11□□□□□ -1.11
Hmgb3O54879 Zfp94-202ENSMUST00000108436 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Gm25766-201ENSMUST00000104101 131 ntBASIC8.11□□□□□ -1.11
Hmgb3O54879 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Hmgb3O54879 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Hmgb3O54879 Gm15032-201ENSMUST00000118547 411 ntBASIC8.11□□□□□ -1.11
Hmgb3O54879 Gm13981-201ENSMUST00000122360 447 ntBASIC8.11□□□□□ -1.11
Hmgb3O54879 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms