Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm12258-201ENSMUST00000093768 2524 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Efcab3-201ENSMUST00000021029 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Gm43813-201ENSMUST00000196847 2294 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC8.14□□□□□ -1.11
Trim63Q38HM4 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim63Q38HM4 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Chrna5-201ENSMUST00000093844 1877 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm6368-201ENSMUST00000119727 2147 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm12154-201ENSMUST00000145584 445 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm28686-201ENSMUST00000187404 609 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm37390-201ENSMUST00000192452 872 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm45059-201ENSMUST00000205558 1077 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm9299-201ENSMUST00000206392 1140 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 AC164437.3-201ENSMUST00000228323 347 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Klk1b4-201ENSMUST00000077354 839 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Mmp27-202ENSMUST00000151853 1673 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.13□□□□□ -1.11
Trim63Q38HM4 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Rnf185-202ENSMUST00000077078 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Osgepl1-202ENSMUST00000114484 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Slc26a8-201ENSMUST00000114764 3670 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Cdh16-213ENSMUST00000212882 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim63Q38HM4 Gm17259-201ENSMUST00000181520 4608 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm42603-201ENSMUST00000199893 2146 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Tomm40l-202ENSMUST00000111326 2753 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm26628-201ENSMUST00000181028 1719 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm12269-201ENSMUST00000122273 717 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm8459-201ENSMUST00000162504 760 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms