Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Clrn1Q8K445 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Clrn1Q8K445 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ica1l-205ENSMUST00000189776 1320 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm14239-201ENSMUST00000116491 685 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm15036-201ENSMUST00000118880 400 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm24140-201ENSMUST00000122773 326 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm3687-201ENSMUST00000161710 460 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm29617-201ENSMUST00000185730 610 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm37436-201ENSMUST00000193842 1085 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 4930448C13Rik-205ENSMUST00000221781 806 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 AC169511.1-201ENSMUST00000227639 995 ntBASIC9.43□□□□□ -0.9
Clrn1Q8K445 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm9946-201ENSMUST00000008011 1025 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ccdc38-201ENSMUST00000092215 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Ubap2-201ENSMUST00000030143 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Zeb2-215ENSMUST00000200844 4064 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Dgkd-201ENSMUST00000027517 5695 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Pdk4-201ENSMUST00000019721 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Clrn1Q8K445 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Pla2g5-202ENSMUST00000102511 690 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm12009-201ENSMUST00000121361 1100 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Uspl1-206ENSMUST00000122160 3827 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm23999-201ENSMUST00000158057 104 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Art2a-ps-201ENSMUST00000173420 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm7765-201ENSMUST00000182585 974 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm8384-201ENSMUST00000190905 704 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 AC124356.1-201ENSMUST00000221469 698 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 CT025642.1-201ENSMUST00000224734 1219 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 AC154176.1-201ENSMUST00000225897 220 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 AC102523.1-201ENSMUST00000228706 1144 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms