Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1bQ9Z2C6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1bQ9Z2C6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1bQ9Z2C6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1bQ9Z2C6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.14■□□□□ 0.5
Upk1bQ9Z2C6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1bQ9Z2C6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1bQ9Z2C6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Upk1bQ9Z2C6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1bQ9Z2C6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms