Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.86■□□□□ 0.77
Cldn3Q9Z0G9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn3Q9Z0G9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn3Q9Z0G9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cldn3Q9Z0G9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cldn3Q9Z0G9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cldn3Q9Z0G9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cldn3Q9Z0G9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Cldn3Q9Z0G9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.84■□□□□ 0.77
Cldn3Q9Z0G9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn3Q9Z0G9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn3Q9Z0G9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn3Q9Z0G9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn3Q9Z0G9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cldn3Q9Z0G9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn3Q9Z0G9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cldn3Q9Z0G9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.83■□□□□ 0.77
Cldn3Q9Z0G9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cldn3Q9Z0G9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Cldn3Q9Z0G9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.83■□□□□ 0.76
Cldn3Q9Z0G9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn3Q9Z0G9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn3Q9Z0G9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn3Q9Z0G9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn3Q9Z0G9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn3Q9Z0G9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.79■□□□□ 0.76
Cldn3Q9Z0G9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn3Q9Z0G9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn3Q9Z0G9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms