Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.16■□□□□ 0.66
Cdh17Q9R100 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh17Q9R100 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdh17Q9R100 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdh17Q9R100 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cdh17Q9R100 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.15■□□□□ 0.66
Cdh17Q9R100 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh17Q9R100 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.15■□□□□ 0.66
Cdh17Q9R100 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh17Q9R100 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh17Q9R100 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh17Q9R100 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh17Q9R100 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cdh17Q9R100 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cdh17Q9R100 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh17Q9R100 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.14■□□□□ 0.65
Cdh17Q9R100 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh17Q9R100 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh17Q9R100 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.14■□□□□ 0.65
Cdh17Q9R100 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.14■□□□□ 0.65
Cdh17Q9R100 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.14■□□□□ 0.65
Cdh17Q9R100 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh17Q9R100 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh17Q9R100 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh17Q9R100 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cdh17Q9R100 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Cdh17Q9R100 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.12■□□□□ 0.65
Cdh17Q9R100 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh17Q9R100 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdh17Q9R100 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cdh17Q9R100 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cdh17Q9R100 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh17Q9R100 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh17Q9R100 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh17Q9R100 AA386476-201ENSMUST00000098781 1665 ntBASIC19.11■□□□□ 0.65
Cdh17Q9R100 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh17Q9R100 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh17Q9R100 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.11■□□□□ 0.65
Cdh17Q9R100 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
Cdh17Q9R100 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh17Q9R100 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh17Q9R100 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh17Q9R100 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh17Q9R100 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.1■□□□□ 0.65
Cdh17Q9R100 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh17Q9R100 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh17Q9R100 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh17Q9R100 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh17Q9R100 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.09■□□□□ 0.65
Cdh17Q9R100 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cdh17Q9R100 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh17Q9R100 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh17Q9R100 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh17Q9R100 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cdh17Q9R100 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.08■□□□□ 0.64
Cdh17Q9R100 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.08■□□□□ 0.64
Cdh17Q9R100 Gm45102-201ENSMUST00000207427 857 ntBASIC19.08■□□□□ 0.64
Cdh17Q9R100 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cdh17Q9R100 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Cdh17Q9R100 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cdh17Q9R100 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Cdh17Q9R100 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh17Q9R100 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh17Q9R100 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh17Q9R100 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh17Q9R100 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.06■□□□□ 0.64
Cdh17Q9R100 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cdh17Q9R100 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms