Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Chrna6Q9R0W9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chrna6Q9R0W9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chrna6Q9R0W9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chrna6Q9R0W9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Chrna6Q9R0W9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna6Q9R0W9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.91■□□□□ 0.78
Chrna6Q9R0W9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna6Q9R0W9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.91■□□□□ 0.78
Chrna6Q9R0W9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna6Q9R0W9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chrna6Q9R0W9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Chrna6Q9R0W9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chrna6Q9R0W9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Chrna6Q9R0W9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
Chrna6Q9R0W9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.89■□□□□ 0.77
Chrna6Q9R0W9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chrna6Q9R0W9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chrna6Q9R0W9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chrna6Q9R0W9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chrna6Q9R0W9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Chrna6Q9R0W9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna6Q9R0W9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chrna6Q9R0W9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.88■□□□□ 0.77
Chrna6Q9R0W9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms