Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Mmp17Q9R0S3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Mmp17Q9R0S3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp17Q9R0S3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp17Q9R0S3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp17Q9R0S3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp17Q9R0S3 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Mmp17Q9R0S3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp17Q9R0S3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp17Q9R0S3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp17Q9R0S3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Mmp17Q9R0S3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp17Q9R0S3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Gm7290-201ENSMUST00000104990 617 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Gm12918-201ENSMUST00000120234 636 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Gm15710-201ENSMUST00000121821 636 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Gm5075-201ENSMUST00000196916 622 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp17Q9R0S3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mmp17Q9R0S3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 AA386476-201ENSMUST00000098781 1665 ntBASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Mmp17Q9R0S3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Mmp17Q9R0S3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms