Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Tlr4Q9QUK6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.28■□□□□ 0.68
Tlr4Q9QUK6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr4Q9QUK6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tlr4Q9QUK6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tlr4Q9QUK6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr4Q9QUK6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr4Q9QUK6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr4Q9QUK6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Tlr4Q9QUK6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr4Q9QUK6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tlr4Q9QUK6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tlr4Q9QUK6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tlr4Q9QUK6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Gm11421-201ENSMUST00000122124 294 ntBASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tlr4Q9QUK6 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tlr4Q9QUK6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tlr4Q9QUK6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tlr4Q9QUK6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.22■□□□□ 0.67
Tlr4Q9QUK6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr4Q9QUK6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr4Q9QUK6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Gm42642-201ENSMUST00000200683 355 ntBASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr4Q9QUK6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms