Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ClpxQ9JHS4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClpxQ9JHS4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClpxQ9JHS4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClpxQ9JHS4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ClpxQ9JHS4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ClpxQ9JHS4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ClpxQ9JHS4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClpxQ9JHS4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClpxQ9JHS4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.8■□□□□ 0.44
ClpxQ9JHS4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ClpxQ9JHS4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.8■□□□□ 0.44
ClpxQ9JHS4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ClpxQ9JHS4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClpxQ9JHS4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClpxQ9JHS4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClpxQ9JHS4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClpxQ9JHS4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClpxQ9JHS4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClpxQ9JHS4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClpxQ9JHS4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClpxQ9JHS4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClpxQ9JHS4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClpxQ9JHS4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ClpxQ9JHS4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms