Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubb3Q9ERD7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubb3Q9ERD7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Gm7143-201ENSMUST00000222811 859 ntBASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tubb3Q9ERD7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubb3Q9ERD7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubb3Q9ERD7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tubb3Q9ERD7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tubb3Q9ERD7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.46■□□□□ 0.71
Tubb3Q9ERD7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tubb3Q9ERD7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tubb3Q9ERD7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Tubb3Q9ERD7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tubb3Q9ERD7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tubb3Q9ERD7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tubb3Q9ERD7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.42■□□□□ 0.7
Tubb3Q9ERD7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms