Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp4Q9ER80 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp4Q9ER80 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp4Q9ER80 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtp4Q9ER80 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rtp4Q9ER80 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtp4Q9ER80 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Gm18284-201ENSMUST00000172604 624 ntBASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtp4Q9ER80 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtp4Q9ER80 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Gm8495-201ENSMUST00000188740 694 ntBASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtp4Q9ER80 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.36■□□□□ 0.53
Rtp4Q9ER80 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.36■□□□□ 0.53
Rtp4Q9ER80 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rtp4Q9ER80 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rtp4Q9ER80 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp4Q9ER80 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Rtp4Q9ER80 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp4Q9ER80 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtp4Q9ER80 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Rtp4Q9ER80 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtp4Q9ER80 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rtp4Q9ER80 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rtp4Q9ER80 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtp4Q9ER80 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rtp4Q9ER80 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp4Q9ER80 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.33■□□□□ 0.52
Rtp4Q9ER80 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp4Q9ER80 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp4Q9ER80 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtp4Q9ER80 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Spcs1-204ENSMUST00000226782 949 ntBASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtp4Q9ER80 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms