Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Barx1Q9ER42 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Barx1Q9ER42 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Barx1Q9ER42 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.73■□□□□ 0.43
Barx1Q9ER42 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Barx1Q9ER42 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.72■□□□□ 0.43
Barx1Q9ER42 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.72■□□□□ 0.43
Barx1Q9ER42 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.72■□□□□ 0.43
Barx1Q9ER42 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Barx1Q9ER42 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Gm20760-201ENSMUST00000179197 648 ntBASIC17.71■□□□□ 0.43
Barx1Q9ER42 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.71■□□□□ 0.43
Barx1Q9ER42 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Barx1Q9ER42 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Barx1Q9ER42 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Barx1Q9ER42 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Barx1Q9ER42 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Barx1Q9ER42 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Barx1Q9ER42 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Barx1Q9ER42 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Barx1Q9ER42 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Barx1Q9ER42 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Barx1Q9ER42 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Barx1Q9ER42 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Barx1Q9ER42 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.68■□□□□ 0.42
Barx1Q9ER42 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.68■□□□□ 0.42
Barx1Q9ER42 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.68■□□□□ 0.42
Barx1Q9ER42 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Barx1Q9ER42 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Barx1Q9ER42 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Barx1Q9ER42 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Barx1Q9ER42 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Barx1Q9ER42 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Barx1Q9ER42 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Barx1Q9ER42 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Barx1Q9ER42 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Barx1Q9ER42 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.67■□□□□ 0.42
Barx1Q9ER42 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Barx1Q9ER42 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Barx1Q9ER42 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.66■□□□□ 0.42
Barx1Q9ER42 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.66■□□□□ 0.42
Barx1Q9ER42 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Barx1Q9ER42 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.66■□□□□ 0.42
Barx1Q9ER42 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Barx1Q9ER42 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Barx1Q9ER42 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Barx1Q9ER42 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Barx1Q9ER42 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Barx1Q9ER42 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms