Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.61■□□□□ 0.73
Vps35Q9EQH3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps35Q9EQH3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps35Q9EQH3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps35Q9EQH3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Mir7075-201ENSMUST00000184187 82 ntBASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps35Q9EQH3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps35Q9EQH3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vps35Q9EQH3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vps35Q9EQH3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps35Q9EQH3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps35Q9EQH3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps35Q9EQH3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps35Q9EQH3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.58■□□□□ 0.72
Vps35Q9EQH3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.58■□□□□ 0.72
Vps35Q9EQH3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps35Q9EQH3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Vps35Q9EQH3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps35Q9EQH3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps35Q9EQH3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps35Q9EQH3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps35Q9EQH3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Gm6139-201ENSMUST00000079261 882 ntBASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps35Q9EQH3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps35Q9EQH3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps35Q9EQH3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps35Q9EQH3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps35Q9EQH3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps35Q9EQH3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.54■□□□□ 0.72
Vps35Q9EQH3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Vps35Q9EQH3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Vps35Q9EQH3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms