Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp8Q9DB85 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.28■□□□□ 0.68
Rrp8Q9DB85 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp8Q9DB85 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp8Q9DB85 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rrp8Q9DB85 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp8Q9DB85 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.27■□□□□ 0.68
Rrp8Q9DB85 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.27■□□□□ 0.68
Rrp8Q9DB85 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.27■□□□□ 0.68
Rrp8Q9DB85 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.27■□□□□ 0.68
Rrp8Q9DB85 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrp8Q9DB85 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrp8Q9DB85 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rrp8Q9DB85 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp8Q9DB85 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Gm12441-201ENSMUST00000121806 588 ntBASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp8Q9DB85 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp8Q9DB85 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.24■□□□□ 0.67
Rrp8Q9DB85 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.24■□□□□ 0.67
Rrp8Q9DB85 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rrp8Q9DB85 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp8Q9DB85 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rrp8Q9DB85 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp8Q9DB85 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp8Q9DB85 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp8Q9DB85 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp8Q9DB85 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp8Q9DB85 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.22■□□□□ 0.67
Rrp8Q9DB85 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rrp8Q9DB85 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rrp8Q9DB85 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rrp8Q9DB85 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp8Q9DB85 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rrp8Q9DB85 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp8Q9DB85 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrp8Q9DB85 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rrp8Q9DB85 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.18■□□□□ 0.66
Rrp8Q9DB85 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Nespas-201ENSMUST00000143738 1083 ntBASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rrp8Q9DB85 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms