Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calr3Q9D9Q6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calr3Q9D9Q6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Calr3Q9D9Q6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Calr3Q9D9Q6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Calr3Q9D9Q6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Grk6-206ENSMUST00000224995 2971 ntBASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Calr3Q9D9Q6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Rarb-207ENSMUST00000225921 2756 ntBASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Gm11687-201ENSMUST00000118911 886 ntBASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Calr3Q9D9Q6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Calr3Q9D9Q6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Calr3Q9D9Q6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Calr3Q9D9Q6 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Calr3Q9D9Q6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms