Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop56Q9D6Z1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop56Q9D6Z1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop56Q9D6Z1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop56Q9D6Z1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop56Q9D6Z1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nop56Q9D6Z1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Nop56Q9D6Z1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Nop56Q9D6Z1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop56Q9D6Z1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nop56Q9D6Z1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop56Q9D6Z1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.14■□□□□ 0.81
Nop56Q9D6Z1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop56Q9D6Z1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop56Q9D6Z1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Nop56Q9D6Z1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nop56Q9D6Z1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop56Q9D6Z1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nop56Q9D6Z1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms