Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sf3a3Q9D554 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Sf3a3Q9D554 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a3Q9D554 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sf3a3Q9D554 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3a3Q9D554 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Gm27502-201ENSMUST00000183495 199 ntBASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sf3a3Q9D554 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3a3Q9D554 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3a3Q9D554 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3a3Q9D554 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.83■□□□□ 0.76
Sf3a3Q9D554 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a3Q9D554 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a3Q9D554 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3a3Q9D554 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sf3a3Q9D554 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3a3Q9D554 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3a3Q9D554 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms