Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Upk1aQ9D132 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1aQ9D132 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1aQ9D132 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Upk1aQ9D132 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Upk1aQ9D132 Gm10232-201ENSMUST00000089221 720 ntBASIC18.65■□□□□ 0.58
Upk1aQ9D132 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1aQ9D132 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Upk1aQ9D132 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Upk1aQ9D132 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Upk1aQ9D132 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.64■□□□□ 0.57
Upk1aQ9D132 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.64■□□□□ 0.57
Upk1aQ9D132 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Upk1aQ9D132 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1aQ9D132 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1aQ9D132 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.63■□□□□ 0.57
Upk1aQ9D132 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1aQ9D132 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1aQ9D132 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1aQ9D132 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1aQ9D132 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1aQ9D132 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Mir6236-201ENSMUST00000184437 123 ntBASIC18.62■□□□□ 0.57
Upk1aQ9D132 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1aQ9D132 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.61■□□□□ 0.57
Upk1aQ9D132 BC021767-201ENSMUST00000126387 1716 ntBASIC18.61■□□□□ 0.57
Upk1aQ9D132 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1aQ9D132 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Upk1aQ9D132 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1aQ9D132 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1aQ9D132 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.59■□□□□ 0.57
Upk1aQ9D132 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.59■□□□□ 0.57
Upk1aQ9D132 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1aQ9D132 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Upk1aQ9D132 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.58■□□□□ 0.57
Upk1aQ9D132 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.58■□□□□ 0.57
Upk1aQ9D132 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Upk1aQ9D132 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.58■□□□□ 0.57
Upk1aQ9D132 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Upk1aQ9D132 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms