Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 AC154231.1-201ENSMUST00000220564 2175 ntBASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ssr1Q9CY50 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ssr1Q9CY50 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ssr1Q9CY50 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ssr1Q9CY50 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Gm9870-201ENSMUST00000063874 645 ntBASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ssr1Q9CY50 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ssr1Q9CY50 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ssr1Q9CY50 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ssr1Q9CY50 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Gm9959-201ENSMUST00000068277 390 ntBASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ssr1Q9CY50 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.09■□□□□ 0.97
Ssr1Q9CY50 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ssr1Q9CY50 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms