Protein–RNA interactions for Protein: Q9CXW6

3100002H09Rik, RIKEN cDNA 3100002H09 gene, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3100002H09RikQ9CXW6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
3100002H09RikQ9CXW6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
3100002H09RikQ9CXW6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
3100002H09RikQ9CXW6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
3100002H09RikQ9CXW6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
3100002H09RikQ9CXW6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
3100002H09RikQ9CXW6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Gm27011-201ENSMUST00000182352 972 ntBASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
3100002H09RikQ9CXW6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
3100002H09RikQ9CXW6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
3100002H09RikQ9CXW6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Gm13146-201ENSMUST00000118508 780 ntBASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Mir5133-201ENSMUST00000174955 77 ntBASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 AA386476-201ENSMUST00000098781 1665 ntBASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
3100002H09RikQ9CXW6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
3100002H09RikQ9CXW6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
3100002H09RikQ9CXW6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
3100002H09RikQ9CXW6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
3100002H09RikQ9CXW6 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.27■□□□□ 0.36
3100002H09RikQ9CXW6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
3100002H09RikQ9CXW6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
3100002H09RikQ9CXW6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
3100002H09RikQ9CXW6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
3100002H09RikQ9CXW6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms