Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Chd1lQ9CXF7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chd1lQ9CXF7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
Chd1lQ9CXF7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Chd1lQ9CXF7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Chd1lQ9CXF7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Chd1lQ9CXF7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.14■■□□□ 1.14
Chd1lQ9CXF7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.14■■□□□ 1.14
Chd1lQ9CXF7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Chd1lQ9CXF7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.14■■□□□ 1.13
Chd1lQ9CXF7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chd1lQ9CXF7 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.14■■□□□ 1.13
Chd1lQ9CXF7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chd1lQ9CXF7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chd1lQ9CXF7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Chd1lQ9CXF7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Chd1lQ9CXF7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chd1lQ9CXF7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Chd1lQ9CXF7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chd1lQ9CXF7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Chd1lQ9CXF7 Gm35558-201ENSMUST00000222675 2219 ntBASIC22.09■■□□□ 1.13
Chd1lQ9CXF7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Chd1lQ9CXF7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chd1lQ9CXF7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Chd1lQ9CXF7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms