Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Khdc3Q9CWU5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.8■□□□□ 0.6
Khdc3Q9CWU5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc3Q9CWU5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Khdc3Q9CWU5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc3Q9CWU5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc3Q9CWU5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.79■□□□□ 0.6
Khdc3Q9CWU5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc3Q9CWU5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Khdc3Q9CWU5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Khdc3Q9CWU5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Khdc3Q9CWU5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Khdc3Q9CWU5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Khdc3Q9CWU5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Khdc3Q9CWU5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.74■□□□□ 0.59
Khdc3Q9CWU5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc3Q9CWU5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Khdc3Q9CWU5 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms