Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pfdn1Q9CWM4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pfdn1Q9CWM4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pfdn1Q9CWM4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pfdn1Q9CWM4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Gm45855-201ENSMUST00000212546 880 ntBASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pfdn1Q9CWM4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Pfdn1Q9CWM4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pfdn1Q9CWM4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Pfdn1Q9CWM4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pfdn1Q9CWM4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Pfdn1Q9CWM4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pfdn1Q9CWM4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pfdn1Q9CWM4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pfdn1Q9CWM4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Gm9812-201ENSMUST00000061934 968 ntBASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pfdn1Q9CWM4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Terc-201ENSMUST00000082862 423 ntBASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pfdn1Q9CWM4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pfdn1Q9CWM4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms